The BLAST jobs traditionally found in the PAP Functional Workflow have been tweaked. The BLASTp jobs were the reason that a functional flow took overnight to complete. As of PAP Functional Workflow v2020.07, BLASTp will no longer be run against Bacterial sequences in the NCBI nonredundant (nr) database. By removing BLASTp against all Bacteria (taxidLearn More…
blast
CPT Galaxy NCBI BLAST Upgrade
Howdy everyone! The Galaxy Admin team is happy to announce that we’ll be upgrading both the BLAST+ tools and databases available on CPT Galaxy. The BLAST tools will be updated to version 2.9.0 and will make several features that the main NCBI site has available for use in Galaxy, such as filtering by Taxonomy IDLearn More…
CPT Blast Database Updates & Workflow Updates
In the coming weeks we will be updating the BLAST Databases that the CPT Maintains. We are working to add an automated job that will download a fresh blast database every two weeks. You will be able to see the status and progress of this job if you are curious about what we’re doing. AdditionallyLearn More…