Additional Analyses

This section of tutorials covers additional analyses for specific or advanced annotation needs.

Requirements

Before diving into this topic, we recommend you to have a look at:

Lesson	Slides	Hands-on
Phage Comparative Genomics Tools
Using HHPred for Protein Analysis
Adding Custom Evidence Tracks to Apollo
Loading Existing Genbank File into Apollo
Finding and Annotating Lysis Genes
Generating the Genome Annotation Table
Re-opening an Existing Apollo Record with Annotations
Advanced Lysis Gene Search
Finding Interrupted Genes Using the Interrupted Gene Detection Tool
How to Extract a SVG file from the X-vis Output in Galaxy

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