Noticed any changes around here recently? In the past few months, we have performed significant maintenance on the entire CPT Galaxy and Apollo ecosystems. In addition to updating the platforms to current community releases, many workflows and tools were modified to improve functionality and efficiency. To keep both seasoned and new users up to speedLearn More…
Galaxy Updates
New Tool: Deduplicate FastQ files
Tired of waiting so long for an assembly? Maybe the Deduplicate FastQ tool is for you. It will quickly and efficiently reduce your FastQ datasets to only unique entries. The reduced dataset will have faster downstream processing. This external tool added by Anthony Criscione can be found under CPT: OTHER. Please email the support teamLearn More…
New Tool: tRNAScan-SE
Another tRNA prediction tool has been added to the CPT Galaxy repertoire: tRNAScan-SE. In version 2.0, the default is set to use the bacterial model for prediction on any input nucleotide fasta. Accompanying tRNAScan-SE is a format conversion script Convert tRNAscan-SE table to gff format, written in-house by Anthony Criscione, that allows this data toLearn More…