How to Analyze Your Data with PAUSE3 Once you’ve run your analysis in PAUSE, you may be wondering how to interpret the plots you receive. This short guide should assist you in just that. Good Results After running PAUSE Plotter on raw sequencing data, good quality data will produce output that looks like the following:Learn More…
Galaxy Updates
Galaxy Tool News: JBrowse-in-Galaxy v0.4 released
The latest version of my JBrowse Galaxy wrapper (TAMU, Public) has been released! It features lots of exciting new features: Support for dataset collectionSupport for all coding tablesAdvanced styling options for colouring and colour coding your tracksMultiple file selections (easily select + style a whole group of tracks at once)Simplified tool interface (in places. MoreLearn More…
Galaxy Tool News: Codon Optimizer, Gff3 Filters
Some exciting new tool updates; a couple of tools to help you filter GFF3 files in your analyses based on Shine Dalgarno sequences and “Phage Start Codons”, and an update to the CPT’s own Codon Optimizer Sometimes in your analyses you find yourself producing a gff3 file of naive gene calls, and have thousands ofLearn More…